Biomedical and Translational Informatics Laboratory

  

EDGE 2017 Agenda:

   ** last updated 2/9/2017**

Wednesday, February 8, 2017

  Arrivals

Thursday, February 9, 2017

8:30 AM   Breakfast and Registration   Terrace 

9:00 AM

Welcome and Scientific Remarks by Drs. Jason Moore & Marylyn Ritchie Salon C

9:30 AM

Dr. Jason Moore
Hidden Epistasis

10:00 AM

Alon Keinan, PhD - Keynote
Gene-gene Interactions in Association Studies:
Methods, Applications, and Commentary 

10:30 AM

Break
10:45 AM

Chris Bauer, Pendergrass Lab
Phenotypic Interaction: The other side of epistasis

11:15 AM

Zaya Battogtokh and James D. Malley - Keynote
The Optimal Crowd Learning Machine

11:45 AM Discussion
12:00 PM Catered Lunch Terrace
1:00 PM

Shefali Setia, Ritchie Lab
In Search of epistatic features

Salon C
1:30 PM

Trudy F. C. Mackay, PhD, FRS - Keynote
Effect of Genetic Architecture on the Prediction Accuracy of Quantitative Traits

2:00 PM Discussion
2:30 PM Break
2:45 PM

Ryan Urbanowicz , Moore Lab
Feature selection with REBATE

3:15 PM

Discussion

4:00 PM Adjourn for the day (Dinner on your own)

Friday, February 10, 2017

8:30 AM  Breakfast   Terrace 
9:00 AM

Britney Graham, Williams Lab

Salon C
9:30 AM

Daniel R. Weinberger, M.D. - Keynote
genomic insights to developmental origins of schizophrenia

10:00 AM Discussion
10:30 AM Break
11:00 AM

Joan E. Bailey-Wilson, Ph.D. - Keynote
Detection of interacting features in unrelateds and families: r2VIM and TrioRF

11:15 AM

Emily Holzinger, Wilson Lab
r2VIM: the benefit of recurrency for Random Forest based variable selection

11:30 AM

Qing Li, Wilson Lab
Comparing Different Splitting Criteria for Trio Random Forest

11:45 AM Discussion
12:00 PM Catered Lunch Terrace
1:00 PM Dr. Yong Chen
Embracing heterogeneity: the phylogenY-aware Effect size Tests for Interactions (YETI)
Salon C
1:30 PM Group Discussion
3:00 PM Cocktail Hour Poolside
5:00 PM Dinner on your own

Saturday, February 11, 2017

  Departures

Supplementary Data

INTEGRATING CLINICAL LABORATORY MEASURES AND ICD-9 CODE DIAGNOSES IN PHENOME-WIDE ASSOCIATION STUDIES

ANURAG VERMA, JOSEPH B. LEADER, SHEFALI S. VERMA, ALEX FRASE, JOHN WALLACE, SCOTT DUDEK, DANIEL R. LAVAGE, CRISTOPHER V. VAN HOUT, FREDERICK E. DEWEY, JOHN PENN, ALEX LOPEZ, JOHN D. OVERTON, DAVID J. CAREY, DAVID H. LEDBETTER, H. LESTER KIRCHNER, MARYLYN D. RITCHIE, SARAH A. PENDERGRASS

Supplementary files:

High resolution figures in the paper:

Supplementary Data

KNOWLEDGE DRIVEN BINNING AND PHEWAS ANALYSIS IN MARSHFIELD PERSONALIZED MEDICINE RESEARCH PROJECT USING BIOBIN

ANNA O BASILE, JOHN R WALLACE, PEGGY PEISSIG, CATHERINE A MCCARTY, MURRAY BRILLIANT, MARYLYN D RITCHIE

Supplementary files: